| HOG | COG | KOG | arCOG | COG description | NRC-1 annotation |
|---|---|---|---|---|---|
| cHOG0412 | COG0085 | KOG0216 KOG0214 KOG0215 | arCOG01762 | DNA-directed RNA polymerase beta subunit/140 kD subunit | DNA-directed RNA polymerase subunit B'' |
| HOG | Organism | Gene ID | Name | Annotation |
|---|---|---|---|---|
| cHOG0412 | nrc1 | VNG2666 | rpoB'' | DNA-directed RNA polymerase subunit B'' |
| cHOG0412 | hmu | HMUK0515 | Hmuk_0515 | RNA polymerase beta subunit( EC:2.7.7.6 ) |
| cHOG0412 | hma | RRNAC2430 | rpoB | DNA-directed RNA polymerase subunit beta'' |
| cHOG0412 | hwa | HQ3396A | rpoB2 | DNA-directed RNA polymerase subunit beta'' |
| cHOG0412 | hla | HLAC0107 | Hlac_107 | RNA polymerase beta subunit |
| cHOG0412 | hbo | HBOR28240 | Hbor_28240 | DNA-directed RNA polymerase, subunit B''( EC:2.7.7.6 ) |
| cHOG0412 | hut | HUTA0784 | Huta_0784 | RNA polymerase beta subunit |
| cHOG0412 | hvo | HVO_0347 | HVO_0347 | DNA-directed RNA polymerase beta subunit |
| cHOG0412 | nph | NP0110A | rpoB2 | DNA-directed RNA polymerase subunit beta'' |
| cHOG0412 | hhi | 2862 | rpoB'' | DNA-directed RNA polymerase subunit B'' |
MUSCLE (3.6) multiple sequence alignment
2666|gene|nrc1 MLQEDKRELSESYFSKERLAEHHFRSYNAFLEHGMQDVVTEKERIETDIGDKEDEEPVWV
110|gene|nph MNREDRRSVSREYFSRERLAEHHFRSFNNFLDRGMQDVVDEKESIDTDIGDKEGQEPVRV
3396|gene|hwa MNREDRRTVSREYFSEDRLAEHHFRSFNNFLERGMQDVVTEKERIETDIGDKEGEEPVFV
28240|gene|hbo MNRQDRRAVSRQYFSQERLAEHHFRSFNNFLERGMQEVVSEKATIDTDIGDKEGEEPVYV
107|gene|hla MNRQDRRVVSREYFSDERLAEHHFRSFNNFLDRGMQEVVDEKETIETDIGDKEGQEPVYV
12430|gene|hma MDTQDRRAISREYFAKERLAEHHFRSFNAFLDRGMQQVVDEKETIETDIGDKEGQEPVWV
2862|gene|hhi MDTQDRRAISREYFAKERLAEHHFRSFNAFLDRGMQQVVDEKETIETDIGDKEGQEPVWV
784|gene|hut MDTENRRTISREYFSRDRLAEHHFRSFNAFLDRGMQEVVDEKATIETDIGDKEGEEPVWV
* ::.* :* .**: :*********:* **:.***:** ** *:*******.:*** *
2666|gene|nrc1 ELGDVRAVTPRVREADGSEELLYPQEARLRNITYSAPVFMEMSIVRGGEEEEERVLDTTE
110|gene|nph DLGNVRIVTPRVREADGSEELLYPQEARLRNITYSAPVFMEMSIVRGGDEEEEQVVDQAE
3396|gene|hwa ELGDVRIETPRVREADGSEELLFPQEARLRNITYAAPVFMEMSIVRGGDEEQEVVVDNTE
28240|gene|hbo ELGDIRIETPRVREADGSEELLFPQEARLRNITYAAPVFMEMSIIRGGEEEEEVVVDTTE
107|gene|hla ELGDVRMVTPRVREADGSEELLYPQEARLRNITYSAPVFMEMSIVRGGEDEPEQVVDTTE
12430|gene|hma ELGDVRVVTPRVREADGSEELLYPQEARLRNITYSAPVFMEMAIVRGGEEEPEEVVDRTE
2862|gene|hhi ELGDVRVVTPRVREADGSEELLYPQEARLRNITYSAPVFMEMAIVRGGEEEPEEVVDRTE
784|gene|hut ELGDVRIVTPRVREADGSEELLYPQEARLRNITYAAPVFMEMAIVKGGEEEEERVVDQTE
:**::* **************:***********:*******:*:.**::* * *:* :*
2666|gene|nrc1 TKVGRMPIMVGSDKCNISGFSDEELIEIGEDPADPGGYFIINGSERVLMTSEDLAPNKIL
110|gene|nph TKVGRMPVMVGSNKCNIADFNDEELIEIGEDPADPGGYFIVNGSERVLMTSEDLAPNKIL
3396|gene|hwa TKVGRMPIMVGSTKCNIAGLTDEELIDIGEDPVDPGGYFIVNGSERVLMTSEDLAPNKIL
28240|gene|hbo TKVGRMPIMVGSSKCNISNLTDEELVEIGEDPVDPGGYFIVNGSERVLMTSEDLAPNKIL
107|gene|hla TKVGRMPIMVGSNKCNMAGFSDDELIDIGEDPVDPGGYFIVNGSERVLMTSEDLAPNKIL
12430|gene|hma TKIGRMPIMVGSNKCNIAGFTDEELIDIGEDPADPGGYFCVNGSERVLMTSEDLAPNKIL
2862|gene|hhi TKIGRMPIMVGSNKCNIAGFTDEELIDIGEDPADPGGYFCVNGSERVLMTSEDLAPNKIL
784|gene|hut TKVGRMPIMVGSQKCNIAGFSDEELIDIGEDPADPGGYFIVNGSERVLMTSEDLAPNKIL
**:****:**** ***::.:.*:**::*****.****** :*******************
2666|gene|nrc1 AEYDSKYGDEIQVAKTFSQRRGYRALVLVERNREGLLEVSFPSVSGSISFVTLVRALGLE
110|gene|nph AEYDTKYGDEIQIAKTFSQRRGYRALVLCERNRNGILEVSFPSVSGSINFVTLVRALGLE
3396|gene|hwa AEYDSKYGDEIQVAKTFSQRRGYRALVLCERNREGLLEVSFPSVSGSVEFVTLVRALGLE
28240|gene|hbo AEYDTKYGDEIQVAKTFSQRRGYRALVLCERNREGILEVSFPSVSGSVEFVTLVRALGLE
107|gene|hla AEYDSKYGDEIQVAKTFSQRRGYRALVLCERNREGLLEVSFPSVSGSIDFVTLVRALGLE
12430|gene|hma AEYDTKYGDEVQVAKTFSQRRGYRALVLCERTRDGLLEVSFPSVSGSIDFVTLVRALGLE
2862|gene|hhi AEYDTKYGDEVQVAKTFSQRRGYRALVLCERTRDGLLEVSFPSVSGSIDFVTLVRALGLE
784|gene|hut AEYDTKYGDEVQVAKTFSQRRGYRALVLTERTRDGLLEVSFPSVSGSVNFVTLVRALGLE
****:*****:*:*************** **.*:*:***********:.***********
2666|gene|nrc1 SDEEIVHRVSEDPEIVKFMLENLEEADVQTQEEAIEDLGQRVASGQGKNYQLKRANYVID
110|gene|nph SDEEIVHRVSDDPEIVKYMLENLEAAEVQTTSEAIETLGQRVAAGQGKNYQLKRANYVID
3396|gene|hwa SDEEIVHRVSDDPEIVKFMLENLEEASVQTEEEAIETLGKRVASGQGKNYQLKRANYVID
28240|gene|hbo SDEEIVHRVSDDPEIVKYMLENLEEAEVQTEAEAIESLGKRVASGQGKNYQLKRANYVID
107|gene|hla SDEEIVHRVSDDPEIVKFMLENLEEAEVQTTEGAIETLGERVASGQGKNYQLKRANYVID
12430|gene|hma SDEEIVHRVSEDPEIVKFMLENLEEAEVQTTEEAIETLGKRVASGQGKNYQLKRANYVID
2862|gene|hhi SDEEIVHRVSEDPEIVKFMLENLEEAEVQTTEEAIETLGKRVASGQGKNYQLKRANYVID
784|gene|hut SDEEIVHQVSDDPEIVKFMLENLEAAEVQTQEEAIETLGQRVASGQGKNYQLKRANYVID
*******.**:******:****** *.*** *** **:***:****************
2666|gene|nrc1 RYLLPHLHEDGVEEEETRINKAYYLCRMAEACFELALGRREADDKDHYANKRLKVSGDLM
110|gene|nph RYLLPHLHEEGVEDEEVRMNKAVYLCRMAEACFELALGRRESDDKDHYANKRLKVSGDLM
3396|gene|hwa RYLLPHLHEDGIEEEAVRINKAYYLCRMAEACFELALDRRESDDKDHYANKRLKVSGDLM
28240|gene|hbo RYLLPHLHEDGVDEEDVRINKAFYLCRMAEACFELALERRDSDDKDHYANKRLKVSGDLM
107|gene|hla RYLLPHLHEEGVDEEDVRINKAYYLCRMAEACFELALERREADDKDHYANKRLKVSGDLM
12430|gene|hma RYLLPHLHEEGVEEEEVRINKAFYLCRMAEACFELALGRRESDDKDHYANKRLKVSGDLM
2862|gene|hhi RYLLPHLHEEGVEEEEVRINKAFYLCRMAEACFELALGRRESDDKDHYANKRLKVSGDLM
784|gene|hut RYLLPHLHEEGIDEEETRINKAYYLCRMAEACFELALDRRESDDKDHYANKRLKVSGDLM
*********:*:::* .*:*** ************** **::******************
2666|gene|nrc1 KDLFRTALNKLARDVKYQLERANMRNRELTVNTVVRSDVLTERLEHPIATGNWVGGRSGV
110|gene|nph KDLFRTALNKLSRDVKYQLERANMRNRDLSVSTVVRSDVLTERLEHPIATGNWVGGRSGV
3396|gene|hwa KDLFRTALNKLARDVKYQLERANMRNRQLTVSTVVRSDVLTERLEHPIATGNWVGGRSGV
28240|gene|hbo KDLFRTALNKLARDVKYQLERANMRNRQLTVNTVVRSDVLTERLEHPIATGNWVGGRSGV
107|gene|hla RDLFRTALNKLARDVKYQLERANMRNRDLTVNTVVRSDVLTERLEHPIATGNWVGGRSGV
12430|gene|hma TDLFRTALNKLARDVKYQLERANMRNRQLSVSTVVRSDVLTERLEHPIATGNWVGGRSGV
2862|gene|hhi TDLFRTALNKLARDVKYQLERANMRNRQLSVSTVVRSDVLTERLEHPIATGNWVGGRSGV
784|gene|hut RDLFRTALNKLARDVKYQLERANMRNRQLSVSTVVRSDVLTERLEHPIATGNWVGGRSGV
**********:***************:*:*.****************************
2666|gene|nrc1 SQLVDRTDFMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
110|gene|nph SQLVDRTDYMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
3396|gene|hwa SQLVDRTDYMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
28240|gene|hbo SQLVDRTDYMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
107|gene|hla SQLVDRTDYMGVLSHLRRLRSPLSRSQPHFKARDLHATQWGRICPSETPEGPNCGLVKNF
12430|gene|hma SQLVDRTDFMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
2862|gene|hhi SQLVDRTDFMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
784|gene|hut SQLVDRTDFMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
********:*********************:*****************************
2666|gene|nrc1 AQAMELSQDVDDERDLKQELSSMGVEGIPGISMETTSTT----SADD
110|gene|nph AQAMELSQSVEDERRLKRELASMGVEGIPGI--ETVETH----TADD
3396|gene|hwa AQAMELSQNVEDEQSLKRELSSMGVDIFHTS--TSTDDTDTRSPADD
28240|gene|hbo AQAMELSQNIEDEQALKRELASMGVEGIPGI--EGPDPTNT--PADD
107|gene|hla AQAMELSQTVDDEQGLKRELASMGVEGIPGI--EGVDRQ----TADD
12430|gene|hma AQAMELSQDVSDPQGLKQELAEMGVQGIPGI--ESIEQQ----PADD
2862|gene|hhi AQAMELSQDVSDPQGLKQELAEMGVQGIPGI--ESIEQQ----PADD
784|gene|hut AQAMELSQHVEDERELKQTLAEMGVQGIPAI--ETAAQQ----PADD
******** :.* . **. *:.***: : .***